Package index • finimom

All functions

check_ld_disc(): Check discrepancy of the linkage equilibrium and test statistics

clump_variants(): Clump highly correlated variants.

dbb(): Beta-binomial density.

dimom(): Title

estimate_tau(): Estimate tau based on sample size and z score

extract_subchain(): Extract a subchain from exsisting posterior samples, excluding a burn-in.

finimom(): Fine-mapping using an inverse-moment prior.

g(): Negative exponential of the Laplace approximation

generate_sumstats(): Title

get_credible_sets(): Obtain credible sets from the posterior samples.

get_csbf(): Title

get_pips(): Obtain posterior inclusion probabilities from the posterior samples.

logmk(): Model size prior.

logmyb(): Log-marginal likelihood for the data.

multi_finimom(): Multi-trait fine-mapping using an inverse-moment prior.

posterior_samples(): Samples from the posterior distribution

posterior_samples_multitrait(): Samples from the posterior distribution

sample2(): Title

select_causals(): Title

simulate_phenotype_data(): Title