Title

Title

Usage

simulate_phenotype_data(
  X,
  N,
  p,
  causals,
  R2,
  seed,
  meanbeta = 0,
  sdbeta = 1,
  minpower = NULL,
  alpha = NULL
)

Arguments

X

Genotype matrix.

N

Number of individuals.

p

Number of genetic variants.

causals

Indices of causal variants.

R2

Variance explained by causal variants.

seed

Random seed.

meanbeta

Mean of the Gaussian where effect sizes are drawn from.

sdbeta

Standard deviation of the Gaussian where the effect sizes are drawn from.

alpha

Value

List of the phenotype and the betas, after scaling to var(Y) = 1.